Posts Tagged ‘chiroptical’

The Chirality of Lemniscular Octaphyrins

Tuesday, April 28th, 2009

In the previous post,  it was noted that  Möbius annulenes are intrinsically chiral, and should therefore in principle be capable of resolution into enantiomers. The synthesis of such an annulene by Herges and co-workers was a racemic one; no attempt was reported at any resolution into such enantiomers. Here theory can help, since calculating the optical rotation [α]D is nowadays a relatively reliable process for rigid molecules. The rotation (in °) calculated for that Möbius annulene was relatively large compared to that normally measured for most small molecules.

Recently, quite a number of cyclopolypyrroles, more commonly called phyrins, have been reported. The conventional number of pyrrole rings in many biological systems is of course four (chlorophyll, haemoglobin, etc), but these extended porphyrins can have anywhere between five and sixteen such rings comprising a larger macrocycle. For those with six-eight such rings, a commonly adopted geometric motif is found to be a figure-eight, or more properly a lemniscular one. Such shapes have recently (10.1021/ol703129z) been recognized as also being Möbius systems, albeit this time with two half twists in the π-electron cycle rather than just the single twist synthesized by Herges. As such, they also follow a simple electronic selection rule, being aromatic if 4n+2 π-electrons circulate around the ring.

One such molecule is shown below (10.1039/b502327k), albeit with four of the pyrroles replaced by a thiophene ring.

A 34-Octaphyrin. Click to see molecule

A 34-Octaphyrin. Click for 3D.

Just as with the Herges syntheses, most of these phyrins are also made as racemates. There appears to be only one report of such octaphyrin actually being separated into enantiomers (10.1002/(SICI)1521-3773(19991216)38:24<3650::AID-ANIE3650>3.0.CO;2-F) but no optical rotation could be measured due to its intense colour (in other words, so much light is absorbed by the system that too little remains to measure its rotation). So no-one knows what the magnitudes of the optical rotation values for these figure-eight or lemniscular molecules actually are.

Here again, theory can come to the rescue. The octaphyrin shown above for example (simplified such that Ar=H), [α]D has the stupendous value of -25517° (See 10042/to-2185). Values above 10,000 are common for this type of molecule! So these relatively small and simple class of molecules are currently easily the record holders for the size of their optical rotations. OK, the latter are merely predictions, but it certainly should serve as an encouragement for experimental measurements of this property.

Oh, by the way, if you click on the graphic above, you will get to see a molecular orbital calculated for the molecule. It is the most stable of the π-type of MOs, and shows the characteristic features of the lemniscate, namely the π-electrons take the form of a torus link (10.1039/b810301a).

The chirality of Möbius annulenes

Wednesday, April 22nd, 2009

Much like climbing Mt. Everest because its there,  some hypothetical molecules are just too tantalizing for chemists to resist attempting a synthesis. Thus in 1964, Edgar Heilbronner  speculated on whether a conjugated annulene ring might be twistable into a  Möbius strip. It was essentially a fun thing to try to do, rather than the effort being based on some anticipated  (and useful) property it might have. If you read the original article (rumour has it the idea arose during a lunchtime conversation, and the manuscript was completed by the next day), you will notice one aspect of these molecules that is curious by its absence. There is no mention (10.1016/S0040-4039(01)89474-0) that such Möbius systems will be chiral. By their nature, they have only axes of symmetry, and no planes of symmetry, and such molecules therefore cannot be superimposed upon their mirror image; as is required of a chiral system (for a discussion of the origins and etymology of the term, see 10.1002/chir.20699).

The 16-annulene synthesized by Herges and his team.

The 16-annulene synthesized by Herges and his team. Click for 3D.

Heilbronner’s little vignette had little overt effect on the synthetic community until around 2003, when Rainer Herges announced that a crystalline annulene following this recipe had been rationally synthesized (10.1038/nature02224). This time, the chemical community really sat up and took notice. The synthesis was hailed as a major achievement, ranking (chemically) as similar to climbing Everest. But if you read Herges’ article carefully, yet again you will note the absence of any discussion of the chirality of their molecule. Their synthesis was of course racemic, in other words an equal proportion of both enantiomers was made. Indeed, it is not obvious how a non-racemic synthesis could be carried out, although resolution of the product might be an easier task. So in the absence of any pure enantiomer of this molecule, can one speculate on its chiral properties? One obvious such property is the optical rotation, and in particular the [α]D value in chloroform. Most optically pure molecules with molecular weights of < 500 Daltons  tend to have rotations also < 500°. Few molecules have values > 1000°. Now it should be said at the outset that a molecule with a large optical rotation is not more chiral than a molecule with a smaller value; indeed it seems generally agreed that the question “how chiral is this molecule” is either fairly, or even completely meaningless. But it seems a useful task of having a value to hand which is at least approximately accurate, so that some idea of whether any attempted resolution of the enantiomers has produced optically pure product or not. Fortunately, in the last decade or so, computing a value for [α]D has been entirely viable using the standard programs (see 10.1002/chir.20466 and 10.1021/jo070806i for a discussion). This is also useful for two reasons:

 

  1. If the magnitude of the rotation is > 100°, then the sign of this rotation can be very reliably matched to either enantiomer. This allows the absolute configuration to be assigned with a lot of confidence, and probably much more easily than trying to do it by other methods.
  2. The magnitude itself can be reliably predicted to within 10% of the true value if the molecule is conformationally rigid. However, if it has any rotatable groups (and that even includes e.g. OH groups), then the result can be enormously sensitive to that conformation (or Boltzmann mixture of conformations). Put the other way, calculating the optical rotation could be regarded as a very sensitive way of determining conformations!

So what of the 16-annulene synthesized by Herges and co-workers. Well at the B3LYP/6-311G(2df,2pd) and SCRF(CPCM,solvent=chloroform) level of theory (which is reasonably accurate, although one can do better of course), the enantiomer shown by clicking on the graphic above is predicted to have a rotation of -1355° (for the digital repository entry for the calculation, see 10042/to-2176). That is indeed a large value for such a relatively small molecule, and is probably more reliable because of the lack of conformational ambiguity. Well, you saw the prediction here! Anyone up for testing it experimentally?