{"id":10641,"date":"2013-05-24T10:54:39","date_gmt":"2013-05-24T09:54:39","guid":{"rendered":"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=10641"},"modified":"2013-05-24T10:54:39","modified_gmt":"2013-05-24T09:54:39","slug":"how-should-one-represent-the-anion-of-tosmic","status":"publish","type":"post","link":"https:\/\/www.rzepa.net\/blog\/?p=10641","title":{"rendered":"How should one represent the anion of TosMIC?"},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"10641\">\n<p>The title of this post comes from a comment posted by <a href=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/?p=10518&amp;cpage=1#comment-52740\" target=\"_blank\">Ryan<\/a>, who asks about isocyanide\u2019s role (in the form of the anion of tosyl isocyanide, or TosMIC) in two named reactions, <a href=\"http:\/\/en.wikipedia.org\/wiki\/Van_Leusen_reaction\" target=\"_blank\">Van Leusen<\/a> and Ugi FCR.\u00a0 &#8220;In Van Leusen, it (the isocyanide) acts as an electrophile: however, in Ugi, it acts as a nucleophile&#8221;. Here are some valence bond forms for this species;<\/p>\n<p><img decoding=\"async\" data-attachment-id=\"10642\" data-permalink=\"https:\/\/www.rzepa.net\/blog\/?attachment_id=10642\" data-orig-file=\"https:\/\/www.rzepa.net\/blog\/wp-content\/uploads\/2013\/05\/tosmic.svg\" data-orig-size=\"\" data-comments-opened=\"1\" data-image-meta=\"[]\" data-image-title=\"tosmic\" data-image-description=\"\" data-image-caption=\"\" data-medium-file=\"https:\/\/www.rzepa.net\/blog\/wp-content\/uploads\/2013\/05\/tosmic.svg\" data-large-file=\"https:\/\/www.rzepa.net\/blog\/wp-content\/uploads\/2013\/05\/tosmic.svg\" class=\"aligncenter size-full wp-image-10642\" alt=\"tosmic\" src=\"http:\/\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2013\/05\/tosmic.svg\" width=\"440\" \/><\/p>\n<p>Thus we see representation<strong>\u00a03<\/strong> as a vinyl carbene, and because the carbon is isoelectronic with a carbocation, it could be regarded as an electrophile (with donation into an empty p-orbital). With <strong>2<\/strong>, we see that that this anion is actually isoelectronic with diazomethane <strong>4<\/strong>, a species that can act as a <a href=\"http:\/\/en.wikipedia.org\/wiki\/Diazoalkane_1,3-dipolar_cycloaddition\" target=\"_blank\">1,3-dipole in cycloaddition reactions<\/a>. Form <strong>2<\/strong> is also of interest in another context; the terminal carbon can be regarded as using none of its four valence electrons for bonding (having them all in two lone pairs). Frenking has described such species as divalent C(0), or carbones<span id=\"cite_ITEM-10641-0\" name=\"citation\"><a href=\"#ITEM-10641-0\">[1]<\/a><\/span>.\u00a0 With <strong>1<\/strong>, we see isoelectronic analogy to the acetylide anion, where the terminal carbon is nucleophilic. So three different personalities, and as is often the case, such chameleon character can also reflect in the reactions.<\/p>\n<p>Because <strong>1-3<\/strong> effectively differ in how the two lone pairs are distributed, it is useful to analyse the actual character using a method which can locate and count them. So here is an ELF analysis<span id=\"cite_ITEM-10641-1\" name=\"citation\"><a href=\"#ITEM-10641-1\">[2]<\/a><\/span> which can provide the centroids of electron basins together with the required integration.<\/p>\n<div id=\"attachment_10644\" style=\"width: 422px\" class=\"wp-caption aligncenter\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-10644\" data-attachment-id=\"10644\" data-permalink=\"https:\/\/www.rzepa.net\/blog\/?attachment_id=10644\" data-orig-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2013\/05\/tosmic.jpeg?fit=1143%2C672&amp;ssl=1\" data-orig-size=\"1143,672\" data-comments-opened=\"1\" data-image-meta=\"{&quot;aperture&quot;:&quot;0&quot;,&quot;credit&quot;:&quot;&quot;,&quot;camera&quot;:&quot;&quot;,&quot;caption&quot;:&quot;&quot;,&quot;created_timestamp&quot;:&quot;0&quot;,&quot;copyright&quot;:&quot;&quot;,&quot;focal_length&quot;:&quot;0&quot;,&quot;iso&quot;:&quot;0&quot;,&quot;shutter_speed&quot;:&quot;0&quot;,&quot;title&quot;:&quot;&quot;}\" data-image-title=\"tosmic\" data-image-description=\"\" data-image-caption=\"&lt;p&gt;Click for  3D&lt;\/p&gt;\n\" data-medium-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2013\/05\/tosmic.jpeg?fit=300%2C176&amp;ssl=1\" data-large-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2013\/05\/tosmic.jpeg?fit=450%2C265&amp;ssl=1\" class=\" wp-image-10644  \" onclick=\"jmolInitialize('..\/Jmol\/','JmolAppletSigned.jar');jmolSetAppletColor('white');jmolApplet([500,500],'load wp-content\/uploads\/2013\/05\/tosmic_bas.mol;');\" alt=\"Click for  3D\" src=\"https:\/\/i0.wp.com\/www.ch.imperial.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2013\/05\/tosmic.jpeg?resize=412%2C242\" width=\"412\" height=\"242\" srcset=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2013\/05\/tosmic.jpeg?w=1143&amp;ssl=1 1143w, https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2013\/05\/tosmic.jpeg?resize=300%2C176&amp;ssl=1 300w, https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2013\/05\/tosmic.jpeg?resize=1024%2C602&amp;ssl=1 1024w, https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2013\/05\/tosmic.jpeg?w=900&amp;ssl=1 900w\" sizes=\"auto, (max-width: 412px) 100vw, 412px\" \/><p id=\"caption-attachment-10644\" class=\"wp-caption-text\">Click for 3D<\/p><\/div>\n<p>This reveals <strong>1<\/strong> as the closest match. Thus the terminal carbon has two disynaptic basins and one monosynaptic basin corresponding to 2.71 electrons giving a total valence electron count of 8.08 (which excludes <strong>3<\/strong>), rather closer to acetylide <strong>1<\/strong> than to the carbone <strong>2<\/strong>. Another lone pair is located on the first carbon (2.17) which again matches structure <strong>1<\/strong>, and that carbon is indeed strongly pyramidal, and presumably also strongly nucleophilic. A similar conclusion emerges from NBO analysis, which reveals two\u00a0\u03c0-type NBOs and one terminal lone pair NBO on the isocyanide group, indicating the acetylide form.<\/p>\n<p>I will deal with whether the reactions of this species reflect the nucleophilic or electrophilic character of the isocyanide group in a separate post.<\/p>\n<h2>References<\/h2>\n    <ol class=\"kcite-bibliography csl-bib-body\"><li id=\"ITEM-10641-1\">H.S. Rzepa, \"Gaussian Job Archive for C4H6NO3S(1-)\", 2013. <a href=\"https:\/\/doi.org\/10.6084\/m9.figshare.706756\">https:\/\/doi.org\/10.6084\/m9.figshare.706756<\/a>\n\n<\/li>\n<\/ol>\n\n<\/div> <!-- kcite-section 10641 -->","protected":false},"excerpt":{"rendered":"<p>The title of this post comes from a comment posted by Ryan, who asks about isocyanide\u2019s role (in the form of the anion of tosyl isocyanide, or TosMIC) in two named reactions, Van Leusen and Ugi FCR.\u00a0 &#8220;In Van Leusen, it (the isocyanide) acts as an electrophile: however, in Ugi, it acts as a nucleophile&#8221;. [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[6],"tags":[1080,1082],"class_list":["post-10641","post","type-post","status-publish","format-standard","hentry","category-interesting-chemistry","tag-ugi","tag-van-leusen"],"jetpack_publicize_connections":[],"jetpack_featured_media_url":"","jetpack_sharing_enabled":true,"jetpack_shortlink":"https:\/\/wp.me\/p1gPyz-2LD","jetpack_likes_enabled":true,"_links":{"self":[{"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/posts\/10641","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=10641"}],"version-history":[{"count":0,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/posts\/10641\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=10641"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=10641"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=10641"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}