{"id":1210,"date":"2009-12-01T12:55:59","date_gmt":"2009-12-01T11:55:59","guid":{"rendered":"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=1210"},"modified":"2009-12-01T12:55:59","modified_gmt":"2009-12-01T11:55:59","slug":"the-nature-of-the-cs-triple-bond","status":"publish","type":"post","link":"https:\/\/www.rzepa.net\/blog\/?p=1210","title":{"rendered":"The nature of the C\u2261S triple bond"},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"1210\">\n<p><a href=\"http:\/\/comporgchem.com\/blog\/?p=510\" target=\"_blank\">Steve Bachrach has just blogged<\/a> on a recent article (DOI: <a href=\"http:\/\/dx.doi.org\/10.1002\/anie.200903969\">10.1002\/anie.200903969<\/a>) claiming the isolation of a compound with a C\u2261S triple bond;<\/p>\n<div id=\"attachment_1211\" style=\"width: 211px\" class=\"wp-caption aligncenter\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-1211\" data-attachment-id=\"1211\" data-permalink=\"https:\/\/www.rzepa.net\/blog\/?attachment_id=1211\" data-orig-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2009\/12\/CSCC.jpg?fit=403%2C199&amp;ssl=1\" data-orig-size=\"403,199\" data-comments-opened=\"1\" data-image-meta=\"{&quot;aperture&quot;:&quot;0&quot;,&quot;credit&quot;:&quot;&quot;,&quot;camera&quot;:&quot;&quot;,&quot;caption&quot;:&quot;&quot;,&quot;created_timestamp&quot;:&quot;0&quot;,&quot;copyright&quot;:&quot;&quot;,&quot;focal_length&quot;:&quot;0&quot;,&quot;iso&quot;:&quot;0&quot;,&quot;shutter_speed&quot;:&quot;0&quot;,&quot;title&quot;:&quot;&quot;}\" data-image-title=\"CSCC\" data-image-description=\"\" data-image-caption=\"&lt;p&gt;A compound with a  CS triple bond&lt;\/p&gt;\n\" data-medium-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2009\/12\/CSCC.jpg?fit=300%2C148&amp;ssl=1\" data-large-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2009\/12\/CSCC.jpg?fit=403%2C199&amp;ssl=1\" class=\"size-full wp-image-1211\" title=\"CSCC\" src=\"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2009\/12\/CSCC.jpg?resize=201%2C101\" alt=\"A compound with a CS triple bond\" width=\"201\" height=\"101\" \/><p id=\"caption-attachment-1211\" class=\"wp-caption-text\">A compound with a C\u2261S triple bond<\/p><\/div>\n<p>Steve notes that Schreiner and co claim a \u201cstructure with a rather strong CS double bond or a weak triple bond\u201d. With this size of molecule, the proverbial kitchen sink can be thrown at the analysis of the bonding. But one technique that was NOT applied is ELF (see the <a href=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=1183\" target=\"_blank\">earlier post<\/a> using ELF to analyze the bonding in MgPh<sub>2<\/sub>). So here is such an analysis, computed for the CCSD\/cc-pVTZ wavefunction at the geometry reported in the publication (see also DOI: <a href=\"http:\/\/hdl.handle.net\/10042\/to-2980\" target=\"references\">10042\/to-2980<\/a>). The (centroids of the) synaptic basins are the small purple spheres.<\/p>\n<p><div id=\"attachment_1213\" style=\"width: 360px\" class=\"wp-caption aligncenter\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-1213\" data-attachment-id=\"1213\" data-permalink=\"https:\/\/www.rzepa.net\/blog\/?attachment_id=1213\" data-orig-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2009\/12\/CSCC-elf.jpg?fit=701%2C476&amp;ssl=1\" data-orig-size=\"701,476\" data-comments-opened=\"1\" data-image-meta=\"{&quot;aperture&quot;:&quot;0&quot;,&quot;credit&quot;:&quot;&quot;,&quot;camera&quot;:&quot;&quot;,&quot;caption&quot;:&quot;&quot;,&quot;created_timestamp&quot;:&quot;0&quot;,&quot;copyright&quot;:&quot;&quot;,&quot;focal_length&quot;:&quot;0&quot;,&quot;iso&quot;:&quot;0&quot;,&quot;shutter_speed&quot;:&quot;0&quot;,&quot;title&quot;:&quot;&quot;}\" data-image-title=\"CSCC-elf\" data-image-description=\"\" data-image-caption=\"&lt;p&gt;ELF analysis of the bonding in  HOCCH. Click for  3D&lt;\/p&gt;\n\" data-medium-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2009\/12\/CSCC-elf.jpg?fit=300%2C203&amp;ssl=1\" data-large-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2009\/12\/CSCC-elf.jpg?fit=450%2C306&amp;ssl=1\" class=\"size-full wp-image-1213\" title=\"CSCC-elf\" onclick=\"jmolInitialize('..\/Jmol\/');jmolSetAppletColor('yellow');jmolApplet([500,500],'load wp-content\/uploads\/2009\/12\/CSCC-elf.mol;zoom 120;spin 3;set fontscaling TRUE; font label 14;select atomno=10;label %A 2.36;select atomno=11;label %A 2.0;');\" src=\"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2009\/12\/CSCC-elf.jpg?resize=350%2C238\" alt=\"ELF analysis of the bonding in HOCCH. Click for 3D\" width=\"350\" height=\"238\" srcset=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2009\/12\/CSCC-elf.jpg?w=701&amp;ssl=1 701w, https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2009\/12\/CSCC-elf.jpg?resize=300%2C203&amp;ssl=1 300w\" sizes=\"auto, (max-width: 350px) 100vw, 350px\" \/><p id=\"caption-attachment-1213\" class=\"wp-caption-text\">ELF analysis of the bonding in HOS\u2261CH. Click for 3D<\/p><\/div>The key (disynaptic) basin is labelled <strong>10<\/strong>, and it integrates to 2.36 electrons, rather far from the 6 electrons which might be expected for a triple bond! Its centroid is also significantly off-centre from the S-C bond. Basin <strong>11<\/strong> integrates to 2.01 electrons; it resembles a lone pair on the carbon, although the ELF analysis actually labels it a S-C disynaptic basin. It approximately maps to the HOMO orbital. Monosynaptic basin <strong>9<\/strong> encompases the two formal lone pairs on the sulfur, and it integrates to 3.59e (quite often, what we regard as separate, <em>rabbit-ear<\/em>, lone pairs on an atom manifest only as a single monosynaptic basin). Completing the analysis are two further monosynaptic basins <strong>6<\/strong> and <strong>7<\/strong>, which represent lone pairs on the oxygen (2.45e each) and the disynaptic basin <strong>8<\/strong> (1.1e).<\/p>\n<p>Bonding, much like the Humpty-Dumpty meaning, is very much what you want it to be! But in this case, one has to ask whether the description of the bonding in the C\u2261S region really is best described as a weak triple bond, or even a strong double bond, or whether the nominal six electrons of the triple bond split into two regions, one clearly bonding, the other more non-bonding.<\/p>\n<!-- kcite active, but no citations found -->\n<\/div> <!-- kcite-section 1210 -->","protected":false},"excerpt":{"rendered":"<p>Steve Bachrach has just blogged on a recent article (DOI: 10.1002\/anie.200903969) claiming the isolation of a compound with a C\u2261S triple bond; Steve notes that Schreiner and co claim a \u201cstructure with a rather strong CS double bond or a weak triple bond\u201d. With this size of molecule, the proverbial kitchen sink can be thrown [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[5,6],"tags":[1525,1526,329,348],"class_list":["post-1210","post","type-post","status-publish","format-standard","hentry","category-hypervalency","category-interesting-chemistry","tag-hypervalency","tag-interesting-chemistry","tag-schreiner-and-co","tag-steve-bachrach"],"jetpack_publicize_connections":[],"jetpack_featured_media_url":"","jetpack_sharing_enabled":true,"jetpack_shortlink":"https:\/\/wp.me\/p1gPyz-jw","jetpack_likes_enabled":true,"_links":{"self":[{"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/posts\/1210","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=1210"}],"version-history":[{"count":0,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/posts\/1210\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=1210"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=1210"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=1210"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}