{"id":3462,"date":"2011-01-21T12:30:46","date_gmt":"2011-01-21T11:30:46","guid":{"rendered":"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=3462"},"modified":"2011-01-21T12:30:46","modified_gmt":"2011-01-21T11:30:46","slug":"shorter-is-higher-the-strange-case-of-diberyllium","status":"publish","type":"post","link":"https:\/\/www.rzepa.net\/blog\/?p=3462","title":{"rendered":"Shorter is higher: the strange case of diberyllium."},"content":{"rendered":"<div class=\"kcite-section\" kcite-section-id=\"3462\">\n<p>Much of chemistry is about bonds, but sometimes it can also be about anti-bonds. It is also true that the simplest of molecules can have quite <a href=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=3065\" target=\"_blank\">subtle properties<\/a>. Thus most undergraduate courses in chemistry deal with how to describe the bonding in the diatomics of the first row of the periodic table. Often, only the series C<sub>2<\/sub> to F<sub>2 <\/sub>is covered,\u00a0so as to take into account the paramagnetism of dioxygen, and the triple bonded nature of dinitrogen (but never mentioning the <a href=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=2707\" target=\"_blank\">strongest bond in the universe<\/a>!). Rarely is\u00a0<a href=\"http:\/\/en.wikipedia.org\/wiki\/Molecular_orbital_diagram\" target=\"_blank\">diberyllium<\/a> mentioned,\u00a0\u00a0and yet by its strangeness, it can also teach us a lot of chemistry.<\/p>\n<p>The diagram below is what many textbooks show. The diagram can vary (and hence confuse) slightly, in regard to the relative ordering of the \u03c3 and  \u03c0 energy levels originating from the overlap of the 2p orbitals. It depends on the atom, and for Be, the \u03c3 comes out higher than the \u03c0. The other key ordering is that the \u03c3* antibonding orbital resulting from out of phase overlap of the two 2s orbitals is actually lower in energy than the \u03c0 bonding orbital resulting from in-phase overlap of the 2p orbitals. Yes, an antibonding orbital is more stable than a bonding orbital!<\/p>\n<div id=\"attachment_3464\" style=\"width: 319px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2011\/01\/Be2a.jpg\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-3464\" data-attachment-id=\"3464\" data-permalink=\"https:\/\/www.rzepa.net\/blog\/?attachment_id=3464\" data-orig-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2011\/01\/Be2a.jpg?fit=1236%2C1461&amp;ssl=1\" data-orig-size=\"1236,1461\" data-comments-opened=\"1\" data-image-meta=\"{&quot;aperture&quot;:&quot;0&quot;,&quot;credit&quot;:&quot;&quot;,&quot;camera&quot;:&quot;&quot;,&quot;caption&quot;:&quot;&quot;,&quot;created_timestamp&quot;:&quot;0&quot;,&quot;copyright&quot;:&quot;&quot;,&quot;focal_length&quot;:&quot;0&quot;,&quot;iso&quot;:&quot;0&quot;,&quot;shutter_speed&quot;:&quot;0&quot;,&quot;title&quot;:&quot;&quot;}\" data-image-title=\"Be2a\" data-image-description=\"\" data-image-caption=\"&lt;p&gt;Molecular orbital diagram for  Be2&lt;\/p&gt;\n\" data-medium-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2011\/01\/Be2a.jpg?fit=253%2C300&amp;ssl=1\" data-large-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2011\/01\/Be2a.jpg?fit=450%2C532&amp;ssl=1\" class=\"size-full wp-image-3464\" title=\"Be2a\" src=\"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2011\/01\/Be2a.jpg?resize=309%2C365\" alt=\"\" width=\"309\" height=\"365\" srcset=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2011\/01\/Be2a.jpg?w=1236&amp;ssl=1 1236w, https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2011\/01\/Be2a.jpg?resize=253%2C300&amp;ssl=1 253w, https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2011\/01\/Be2a.jpg?resize=866%2C1024&amp;ssl=1 866w\" sizes=\"auto, (max-width: 309px) 100vw, 309px\" \/><\/a><p id=\"caption-attachment-3464\" class=\"wp-caption-text\">Molecular orbital diagram for  Be2<\/p><\/div>\n<p>Well, the diagram shows that the  pair of occupied molecular orbitals resulting from  the two (symmetric and antisymmetric, or <em>g<\/em> and <em>u<\/em>) combinations of the  1s orbitals cancel each other, as do the  2s combinations, and we conclude the bond order for this molecule is zero!  Actually, if a quantum mechanical calculation <a href=\"http:\/\/hdl.handle.net\/10042\/to-6387\" target=\"_blank\">is performed <\/a>(at the  \u03c9B97XD\/6-311G(d,p) level), the bond length emerges as 2.81\u00c5 and a vibrational wavenumber of 167 cm<sup>-1<\/sup> is predicted. Despite the zero bond order, a weak bond IS predicted, and this is the <strong>van der Waals<\/strong> or <strong>dispersion bond<\/strong>.<\/p>\n<p>Let us now pump this molecule up to a higher energy state by a double excitation of the two electrons in the 2s \u03c3* electrons. We have to split them up, one each, into the next available orbital, which is the \u03c0, to form a triplet state (just like di-oxygen).<\/p>\n<div id=\"attachment_3465\" style=\"width: 319px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2011\/01\/Be2b.jpg\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-3465\" data-attachment-id=\"3465\" data-permalink=\"https:\/\/www.rzepa.net\/blog\/?attachment_id=3465\" data-orig-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2011\/01\/Be2b.jpg?fit=1236%2C1461&amp;ssl=1\" data-orig-size=\"1236,1461\" data-comments-opened=\"1\" data-image-meta=\"{&quot;aperture&quot;:&quot;0&quot;,&quot;credit&quot;:&quot;&quot;,&quot;camera&quot;:&quot;&quot;,&quot;caption&quot;:&quot;&quot;,&quot;created_timestamp&quot;:&quot;0&quot;,&quot;copyright&quot;:&quot;&quot;,&quot;focal_length&quot;:&quot;0&quot;,&quot;iso&quot;:&quot;0&quot;,&quot;shutter_speed&quot;:&quot;0&quot;,&quot;title&quot;:&quot;&quot;}\" data-image-title=\"Be2b\" data-image-description=\"\" data-image-caption=\"&lt;p&gt;The doubly excited state of diberyllium&lt;\/p&gt;\n\" data-medium-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2011\/01\/Be2b.jpg?fit=253%2C300&amp;ssl=1\" data-large-file=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2011\/01\/Be2b.jpg?fit=450%2C532&amp;ssl=1\" class=\"size-full wp-image-3465\" title=\"Be2b\" src=\"https:\/\/i0.wp.com\/www.ch.ic.ac.uk\/rzepa\/blog\/wp-content\/uploads\/2011\/01\/Be2b.jpg?resize=309%2C365\" alt=\"\" width=\"309\" height=\"365\" srcset=\"https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2011\/01\/Be2b.jpg?w=1236&amp;ssl=1 1236w, https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2011\/01\/Be2b.jpg?resize=253%2C300&amp;ssl=1 253w, https:\/\/i0.wp.com\/www.rzepa.net\/blog\/wp-content\/uploads\/2011\/01\/Be2b.jpg?resize=866%2C1024&amp;ssl=1 866w\" sizes=\"auto, (max-width: 309px) 100vw, 309px\" \/><\/a><p id=\"caption-attachment-3465\" class=\"wp-caption-text\">The doubly excited state of diberyllium<\/p><\/div>\n<p>Well, this  (higher energy) state is certainly shorter (a contrast with my item on <a href=\"http:\/\/www.ch.ic.ac.uk\/rzepa\/blog\/?p=485\" target=\"_blank\">longer being stronger<\/a>). The length is now 1.78\u00c5, which is more than  1\u00c5 <strong>shorter<\/strong> than the original state, despite being ~ 45 kcal\/mol <strong>higher<\/strong> in energy. The Be-Be <a href=\"http:\/\/hdl.handle.net\/10042\/to-6389\" target=\"_blank\">stretching wavenumber<\/a> goes up to 917 cm<sup>-1<\/sup>. With four electrons in bonding orbitals, diberyllium has a double bond! One can also pair the \u03c0 electrons up to form an open shell (excited) singlet, which is ~ 51 kcal\/mol <a href=\"http:\/\/hdl.handle.net\/10042\/to-6388\" target=\"_blank\">higher<\/a> than the closed shell (unbonded) singlet. This also has a length of 1.78\u00c5 and a marginally lower stretch of 909 cm<sup>-1<\/sup>. If you want to read more about the doubly excited state of this molecule, see DOI:\u00a0<a href=\"http:\/\/dx.doi.org\/10.1139\/v96-111\" target=\"_blank\">10.1139\/v96-111<\/a>.<\/p>\n<p>One might be tempted to make an analogy between physics, and its particles and antiparticles. Yes, electrons can occupy antibonding as well as bonding orbitals. But the overall bond order will be reduced to zero if the total numbers of each are equal. And one can be pretty certain that there is no molecule at all in which the number of antibonding electrons exceeds the bonding ones! Or, if anyone is aware of such an example, do tell!<\/p>\n<!-- kcite active, but no citations found -->\n<\/div> <!-- kcite-section 3462 -->","protected":false},"excerpt":{"rendered":"<p>Much of chemistry is about bonds, but sometimes it can also be about anti-bonds. It is also true that the simplest of molecules can have quite subtle properties. Thus most undergraduate courses in chemistry deal with how to describe the bonding in the diatomics of the first row of the periodic table. Often, only the [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[6],"tags":[434,147,437,185,440,287,1527],"class_list":["post-3462","post","type-post","status-publish","format-standard","hentry","category-interesting-chemistry","tag-diberyllium","tag-energy","tag-excited-state","tag-higher-energy","tag-higher-energy-state","tag-pence","tag-tutorial-material"],"jetpack_publicize_connections":[],"jetpack_featured_media_url":"","jetpack_sharing_enabled":true,"jetpack_shortlink":"https:\/\/wp.me\/p1gPyz-TQ","jetpack_likes_enabled":true,"_links":{"self":[{"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/posts\/3462","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=3462"}],"version-history":[{"count":0,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=\/wp\/v2\/posts\/3462\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=3462"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=3462"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.rzepa.net\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=3462"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}